Web Application

ProbTF

ProbTF is a web server that enables the analysis of DNA sequences using mouse-specific position weight matrices from the TRANSFAC™ database.

Category: 

EPEPT

A web service for enhanced P-value estimation in permutation tests

Category: 

DoDoMa

DoDoMa is a tool that automatically identifies transcription factors with matching DNA binding domains, and returns all associated position weight matrix (PWM).

Category: 

Pubcrawl

Pubcrawl is an application that combines literature based semantic distances with protein domain interactions to dynamically create network topologies of terms. Often network topologies of gene names created thru pubcrawl resemble known biological pathways and can be used to characterize lesser known associations and identify novel data driven findings for further investigation.

Category: