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William J.R. Longabaugh
Area of Expertise
Software engineering, computer graphics, software applications development
Current Position
Senior Software Engineer
Degree
B.S., Aeronautics and Astronautics, Massachusetts Institute of Technology, 1981
M.S., Computer Science, University of Washington, 1992
Research Interests
Mr. Longabaugh is the developer of BioTapestry, an open-source, freely available software tool for the modeling and visualization of genetic regulatory networks.
Selected Publications
Longabaugh WJR., Davidson EH, Bolouri H. 2009. Visualization, documentation, analysis, and communication of large-scale gene regulatory networks. Biochim. Biophys. Acta, 1789(4): 363-74.
Georgescu ., Longabaugh WJR, Scripture-Adams DD, David-Fung E-S, Yui MA, Zarnegar MA, Bolouri H., Rothenberg EV. 2008. A gene regulatory network armature for T lymphocyte specification. Proc. Natl. Acad. Sci. USA 105: 20100-20105.
Bonneau R, Facciotti MT, Reiss DJ, Schmid AK, Pan M, Kaur A, Thorsson V, Shannon P, Johnson MH, Bare JC, Longabaugh W, Vuthoori M, Whitehead K, Madar A, Suzuki L, Mori T, Chang D-E., DiRuggiero J, Johnson C., Hood L, Baliga NS. 2007. A predictive model for transcriptional control of physiology in a free living cell. Cell 131(7): 1354-65.
Longabaugh W, Bolouri H. 2006. Understanding the dynamic behavior of genetic regulatory networks by functional decomposition. Current Genomics. 7(6): 333-341.
Longabaugh WJR, Davidson EH, Bolouri H. 2005. Computational representation of developmental genetic regulatory networks. Dev. Biol. 283: 1-16.
Relevant Links
BioTapestry home page: http://www.BioTapestry.org/
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